A B C D E F G H I J L M N O P R S T U V W X

F

FEEDBACKSTRING_FINALCHECK - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACKSTRING_NETWORKS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACKSTRING_POSTPROC - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACKSTRING_REANNEALS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACKSTRING_RESTARTS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACKSTRING_STATUS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACKSTRING_TIME - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_COLON - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DASH - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DASHEDLINE - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DEFAULT_CUTOFF_TO_DAYS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DEFAULT_CUTOFF_TO_HOURS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DEFAULT_CUTOFF_TO_MINUTES - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DEFAULT_CUTOFF_TO_SECONDS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DEFAULT_TIME_DAYS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DEFAULT_TIME_HOURS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DEFAULT_TIME_MILLISECS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DEFAULT_TIME_MINUTES - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DEFAULT_TIME_SECONDS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DISPLAYFORMATFORINFLUENCESCORE - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_DISPLAYFORMATFORNETWORKSCORE - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_LINELENGTH - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_NEWLINE - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_NEWLINEPLUSDASHEDLINE - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_NUMBEROFDECIMALSINTIMEDISPLAY - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_OPTION_TIMEFORMAT_DEFAULT - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_OPTION_TIMEFORMAT_IN_D - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_OPTION_TIMEFORMAT_IN_H - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_OPTION_TIMEFORMAT_IN_M - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_OPTION_TIMEFORMAT_IN_MS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_OPTION_TIMEFORMAT_IN_S - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_OPTION_TIMEFORMAT_MIXED - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_PERCENTPADDINGLENGTH - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_QUOTES - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_SEPARATOR_ITEMS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_SEPARATOR_VERTICAL - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_SPACE - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_SPACESFORTRIMMING - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FEEDBACK_TIMEPADDINGLENGTH - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FILE_RESULTS - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FILE_RESULTSXML - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FILE_SUMMARY - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FILE_TRACE - Static variable in class edu.duke.cs.banjo.utility.BANJO
 
FIND - Variable in class edu.duke.cs.banjo.utility.JZOOWildCardFilter
 
FileUtil - class edu.duke.cs.banjo.utility.FileUtil.
Handles all file input and output for the application.
FileUtil() - Constructor for class edu.duke.cs.banjo.utility.FileUtil
 
FileUtil(Settings) - Constructor for class edu.duke.cs.banjo.utility.FileUtil
 
factorsUsed - Variable in class edu.duke.cs.banjo.learner.components.EvaluatorBDe.LogGammaArray
 
fastCacheLevel - Variable in class edu.duke.cs.banjo.learner.components.Evaluator
 
fastNodeScoreCacheFor0parents - Static variable in class edu.duke.cs.banjo.learner.components.EvaluatorBDe
 
fastNodeScoreCacheFor1parent - Static variable in class edu.duke.cs.banjo.learner.components.EvaluatorBDe
 
fastNodeScoreCacheFor2parents - Static variable in class edu.duke.cs.banjo.learner.components.EvaluatorBDe
 
fatalError(SAXParseException) - Method in class edu.duke.cs.banjo.utility.XMLProcessor.JTreeErrorHandler
This will report a fatal error that has occurred; this indicates that a rule has been broken that makes continued parsing either impossible or an almost certain waste of time.
feedbackBasedOnTime() - Method in class edu.duke.cs.banjo.learner.Searcher
 
feedbackBuffer - Variable in class edu.duke.cs.banjo.learner.components.Evaluator
 
feedbackRestarts - Variable in class edu.duke.cs.banjo.learner.Searcher
 
feedbackTimeDelta - Variable in class edu.duke.cs.banjo.learner.Searcher
 
fetchedCachedScoreTracker - Variable in class edu.duke.cs.banjo.learner.components.Evaluator
 
fileID - Variable in class edu.duke.cs.banjo.utility.XMLProcessor
 
fileName - Variable in class edu.duke.cs.banjo.data.observations.PreprocessedObservationsWithFileInfo
 
fileName - Variable in class edu.duke.cs.banjo.utility.FileUtil
 
fileName - Variable in class edu.duke.cs.banjo.utility.XMLProcessor
 
fileReady - Variable in class edu.duke.cs.banjo.utility.FileUtil
 
fileReportInterval - Variable in class edu.duke.cs.banjo.learner.Searcher
 
fileReportTimeDelta - Variable in class edu.duke.cs.banjo.learner.Searcher
 
fileUtil - Variable in class edu.duke.cs.banjo.data.settings.Settings
 
fileWriter - Variable in class edu.duke.cs.banjo.utility.FileUtil
 
fillLogGammaTable() - Method in class edu.duke.cs.banjo.learner.components.EvaluatorBDe.LogGammaArray
 
fillSpaces(String, int) - Static method in class edu.duke.cs.banjo.utility.StringUtil
Utility method: Fills in blank spaces for creating formatted output.
fillSpacesLeft(String, int) - Static method in class edu.duke.cs.banjo.utility.StringUtil
Utility method: Fills in blank spaces for creating formatted output, to the left of the supplied string.
finalCleanup() - Method in class edu.duke.cs.banjo.learner.Searcher
Gathers the final set of data produced by the search, collected from the core components.
findObservationsRowAndColumnCounts(String, String) - Method in class edu.duke.cs.banjo.data.observations.PreprocessedObservations
 
firstParent(int[]) - Method in class edu.duke.cs.banjo.bayesnet.EdgesAsArrayWithCachedStatistics.CycleFinder
 
firstParent(int[]) - Method in class edu.duke.cs.banjo.bayesnet.EdgesAsArrayWithCachedStatistics
 
firstParent(int[]) - Method in class edu.duke.cs.banjo.bayesnet.EdgesAsMatrixWithCachedStatistics
 
foldIntoHighScoreSet(TreeSet, TreeSet, EquivalenceCheckerI, int) - Method in class edu.duke.cs.banjo.utility.NBestProcessor
 
formatDecimalDisplay(double, String) - Static method in class edu.duke.cs.banjo.utility.StringUtil
Utility function for applying formatting to numbers.
formatElapsedTime(double, int, int) - Static method in class edu.duke.cs.banjo.utility.StringUtil
Applies formatting to the elapsed time, based on supplied parameters.
formatForDisplay(String) - Method in class edu.duke.cs.banjo.data.settings.SettingItem
 
formatForDisplay(String) - Method in class edu.duke.cs.banjo.data.settings.Settings
Applies formatting to the supplied string.
formatRightLeftJustified(String, String, String, String, int) - Static method in class edu.duke.cs.banjo.utility.StringUtil
Utility method: Creates a line of text that is both left and right justified.

A B C D E F G H I J L M N O P R S T U V W X