Class Summary |
BANJO |
Defines all constants (numeric, string, etc) used by Banjo. |
BanjoError |
Used for tracking multiple internal "errors", e.g., while trying to validate
the user input. |
BanjoErrorHandler |
Combines the exception handling for various front-end classes. |
BanjoRandomNumber |
Basic utility class for providing random sequences, based on either a fixed seed
or a system time-based seed. |
FileUtil |
Handles all file input and output for the application. |
InfluenceScorer |
Computes the influence score for all the edges in a network, based on the work of
Jing Yu and Alexander Hartemink, as published in Yu, et al., Bioinformatics (2004). |
JZOOWildCardFilter |
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NBestProcessor |
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PostProcessor |
Contains the (optional) post-processing actions. |
PreProcessor |
Contains the pre-processing actions (not yet implemented). |
StringUtil |
Contains a collection of general purpose string-related code. |
XMLProcessor |
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