cwyoo wrote:samanthagonzales wrote:Reuploaded 2 net files fitted using different iss values:
mliver.fit.bayes <- bn.fit(final_subgraph, data = mliver_subset, method = "bayes", iss = 0.1)
mliver.fit.bayes <- bn.fit(final_subgraph, data = mliver_subset, method = "bayes", iss = 1)
Great. Moving forward, iss=1 will work. Please add MT1 and MT2 to the network, update the parameters, and upload the dot and net files.
Please add: TFEB, TFE3, Zkscan3, Lamp1, Lamp2, MAP1LC3B, MCOLN1 and ATP6V0E1 to the network. If any of them were not one of the genes that were selected as significant differential expression, please add them to the dataset and run banjo again.