by rpazo001 » Fri Oct 29, 2021 11:03 am
Update for Project
The data has been discretized and the model network has been constructed ( Naive Bayesian Network).
Step 3 and 4 have been modifed from the proposal.
Step 3 : Data was discretized using -1 (downregulated), not significant (0), 1( upregulated). All datapoints had a logfold change greater than |2| and adjusted p-vale of less than 0.05.
Step 4: I did not use this step as it is necessary for bigger networks because this network only has the top 15 genes, it is not necessary. I completed step 5 instead which was to create a model network. I created a Naive Bayes Network around the gene Dzip3.
- Attachments
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- Class Project Script.R
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