You can download it and get more information from:
http://en.wikipedia.org/wiki/ARACNE
meninonas wrote:Dr. Yoo,
I was having some issues with the installation file so I contacted the individuals from Columbia in order to see if they could assist me.
Nevertheless, I found the following article that I believe could be useful to have.
meninonas wrote:Professor,
It seems that the application isn't meant to be used through Command Prompt as the Protocol itself states "Navigate to the directory where the ARACNE download has been uncompressed". In addition, they actually show a windows through which they do most of the work.
The GUI is implemented in Java and requires JDK 1.5, which should be downloaded (see EQUIPMENT) by clicking on the link ‘Download JDK 5.0 update 7’ (note that the update number might change if new updates are released after publication of this protocol). The Java installer should set all system variables correctly, including the JAVA_HOME variable, which is required by the program. The version of Java installed on a computer can be determined by typing ‘java version’ at a command prompt.
Unpacking...
Checksumming...
0
0
Extracting...
UnZipSFX 5.42 of 14 January 2001, by Info-ZIP (Zip-Bugs@lists.wku.edu).
inflating: jdk-1_5_0_11-linux-i586.rpm
./jdk-1_5_0_11-linux-i586-rpm.bin: 727: ./jdk-1_5_0_11-linux-i586-rpm.bin: rpm: not found
Done.
meninonas wrote:Dr. Yoo,
The actual protocol instructs on how to do it besides Command Prompt.
In addition, I'm having downloading JDK 5.0. The Protocol gives the following information:The GUI is implemented in Java and requires JDK 1.5, which should be downloaded (see EQUIPMENT) by clicking on the link ‘Download JDK 5.0 update 7’ (note that the update number might change if new updates are released after publication of this protocol). The Java installer should set all system variables correctly, including the JAVA_HOME variable, which is required by the program. The version of Java installed on a computer can be determined by typing ‘java version’ at a command prompt.
I've tried downloading it from the following link:
http://www.oracle.com/technetwork/java/ ... 19410.html
Nevertheless, when I try to install the following package jdk-1_5_0_11-linux-i586-rpm.bin, it has errors installing. It gives me the following error:
- Code: Select all
Unpacking...
Checksumming...
0
0
Extracting...
UnZipSFX 5.42 of 14 January 2001, by Info-ZIP (Zip-Bugs@lists.wku.edu).
inflating: jdk-1_5_0_11-linux-i586.rpm
./jdk-1_5_0_11-linux-i586-rpm.bin: 727: ./jdk-1_5_0_11-linux-i586-rpm.bin: rpm: not found
Done.
So I haven't been able to properly install ARACNE.
meninonas wrote:Dr. Yoo,
The way that the instruction manual is written, it seems that this installation is required regardless of Command Prompt.
[PARA] InputFile: /luis/Downloads/MasterFile.txt
[PARA] Output File:
[PARA] Algorithm: fixed_bandwidth
[PARA] Kernel width: determined by program
[PARA] MI P-value: 1
[PARA] DPI Tolerance: 1
Bad File
Problem with reading the file.
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