GSE73199- GPL10123
After 10 hours of running the code, it arrived at an error. I've tried cleaning this file multiple times and all the other times, it didn't stop running, even if I left it to run overnight.
Below in the results the dscrt file is missing, but I assume it's because there is an error.
SMLG (Statistical Machine Learning Group) Discussion Forum
Changwon Yoo, S.M., Ph.D., PI
GEO Microarray Data Cleaning
Re: GEO Microarray Data Cleaning
by sbainazeersheikh » Tue Jul 17, 2018 12:01 pm
- Attachments
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GSE73199avg.txt- (1.47 MiB) Downloaded 2240 times
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- GSE73199zscore.txt
- (1.16 MiB) Downloaded 2305 times
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- GSE73199aftexcel.txt
- (48.26 MiB) Downloaded 2253 times
- sbainazeersheikh
- Posts: 7
- Joined: Sun Jun 24, 2018 5:27 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 3:50 pm
Files for GSE53228-GPL6480
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- GSE532286480zscore.txt
- (10.69 MiB) Downloaded 2295 times
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- GSE532286480dscrt.txt
- (2.67 MiB) Downloaded 2338 times
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- GSE532286480avg.txt
- (6.88 MiB) Downloaded 2324 times
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- GSE532286480aftexcel.txt
- (12.01 MiB) Downloaded 2281 times
Last edited by JoshK on Wed Jul 18, 2018 4:38 pm, edited 1 time in total.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 4:12 pm
Files for GSE49822
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- GSE49822zscore.txt
- (11.13 MiB) Downloaded 2324 times
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- GSE49822dscrt.txt
- (3.01 MiB) Downloaded 2340 times
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- GSE49822avg.txt
- (4.02 MiB) Downloaded 2330 times
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- GSE49822aftexcel.txt
- (8.42 MiB) Downloaded 2310 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 5:18 pm
Files for GSE42670-GPL6244
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- GSE426706244zscore.txt
- (24.21 MiB) Downloaded 2316 times
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- GSE426706244dscrt.txt
- (5.63 MiB) Downloaded 2322 times
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- GSE426706244avg.txt
- (12.07 MiB) Downloaded 2300 times
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- GSE426706244aftexcel.txt
- (20.96 MiB) Downloaded 2311 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:07 pm
Files for GSE36245
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- GSE36245zscore.txt
- (22.36 MiB) Downloaded 2327 times
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- GSE36245dscrt.txt
- (5.18 MiB) Downloaded 2379 times
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- GSE36245avg.txt
- (7.37 MiB) Downloaded 2367 times
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- GSE36245aftexcel.txt
- (16.04 MiB) Downloaded 2320 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:31 pm
Files for GSE32374
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- GSE32374zscore.txt
- (11.97 MiB) Downloaded 2323 times
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- GSE32374dscrt.txt
- (2.96 MiB) Downloaded 2307 times
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- GSE32374avg.txt
- (8.28 MiB) Downloaded 2358 times
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- GSE32374aftexcel.txt
- (16.12 MiB) Downloaded 2383 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 7:19 pm
Files for GSE25632
- Attachments
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- GSE256326884zscore.txt
- (14.45 MiB) Downloaded 2295 times
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- GSE256326884dscrt.txt
- (3.6 MiB) Downloaded 2312 times
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- GSE256326884avg.txt
- (7.88 MiB) Downloaded 2280 times
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- GSE256326884aftexcel.txt
- (13.09 MiB) Downloaded 2262 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 11:59 am
The GSE24558-GPL8736 File took multiple days to finish running and did not yield any files. Additionally, there were no visible error messages in the code.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:26 pm
Files for GSE13041-GPL570
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- GSE13041570zscore.txt
- (15.4 MiB) Downloaded 2342 times
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- GSE13041570dscrt.txt
- (3.72 MiB) Downloaded 2308 times
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- GSE13041570avg.txt
- (6.99 MiB) Downloaded 2285 times
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- GSE13041570aftexcel.txt
- (14.24 MiB) Downloaded 2301 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:33 pm
Files for GSE13041-GPL8300
- Attachments
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- GSE130418300zscore.txt
- (8.31 MiB) Downloaded 2248 times
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- GSE130418300dscrt.txt
- (1.98 MiB) Downloaded 2252 times
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- GSE130418300avg.txt
- (3.77 MiB) Downloaded 2226 times
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- GSE130418300aftexcel.txt
- (6.22 MiB) Downloaded 2269 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
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