GSE73199- GPL10123
After 10 hours of running the code, it arrived at an error. I've tried cleaning this file multiple times and all the other times, it didn't stop running, even if I left it to run overnight.
Below in the results the dscrt file is missing, but I assume it's because there is an error.
SMLG (Statistical Machine Learning Group) Discussion Forum
Changwon Yoo, S.M., Ph.D., PI
GEO Microarray Data Cleaning
Re: GEO Microarray Data Cleaning
by sbainazeersheikh » Tue Jul 17, 2018 12:01 pm
- Attachments
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GSE73199avg.txt- (1.47 MiB) Downloaded 2016 times
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- GSE73199zscore.txt
- (1.16 MiB) Downloaded 2080 times
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- GSE73199aftexcel.txt
- (48.26 MiB) Downloaded 2040 times
- sbainazeersheikh
- Posts: 7
- Joined: Sun Jun 24, 2018 5:27 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 3:50 pm
Files for GSE53228-GPL6480
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- GSE532286480zscore.txt
- (10.69 MiB) Downloaded 2077 times
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- GSE532286480dscrt.txt
- (2.67 MiB) Downloaded 2118 times
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- GSE532286480avg.txt
- (6.88 MiB) Downloaded 2097 times
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- GSE532286480aftexcel.txt
- (12.01 MiB) Downloaded 2065 times
Last edited by JoshK on Wed Jul 18, 2018 4:38 pm, edited 1 time in total.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 4:12 pm
Files for GSE49822
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- GSE49822zscore.txt
- (11.13 MiB) Downloaded 2093 times
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- GSE49822dscrt.txt
- (3.01 MiB) Downloaded 2111 times
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- GSE49822avg.txt
- (4.02 MiB) Downloaded 2117 times
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- GSE49822aftexcel.txt
- (8.42 MiB) Downloaded 2084 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 5:18 pm
Files for GSE42670-GPL6244
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- GSE426706244zscore.txt
- (24.21 MiB) Downloaded 2098 times
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- GSE426706244dscrt.txt
- (5.63 MiB) Downloaded 2097 times
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- GSE426706244avg.txt
- (12.07 MiB) Downloaded 2070 times
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- GSE426706244aftexcel.txt
- (20.96 MiB) Downloaded 2086 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:07 pm
Files for GSE36245
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- GSE36245zscore.txt
- (22.36 MiB) Downloaded 2104 times
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- GSE36245dscrt.txt
- (5.18 MiB) Downloaded 2156 times
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- GSE36245avg.txt
- (7.37 MiB) Downloaded 2146 times
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- GSE36245aftexcel.txt
- (16.04 MiB) Downloaded 2104 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:31 pm
Files for GSE32374
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- GSE32374zscore.txt
- (11.97 MiB) Downloaded 2095 times
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- GSE32374dscrt.txt
- (2.96 MiB) Downloaded 2101 times
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- GSE32374avg.txt
- (8.28 MiB) Downloaded 2148 times
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- GSE32374aftexcel.txt
- (16.12 MiB) Downloaded 2165 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 7:19 pm
Files for GSE25632
- Attachments
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- GSE256326884zscore.txt
- (14.45 MiB) Downloaded 2067 times
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- GSE256326884dscrt.txt
- (3.6 MiB) Downloaded 2092 times
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- GSE256326884avg.txt
- (7.88 MiB) Downloaded 2046 times
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- GSE256326884aftexcel.txt
- (13.09 MiB) Downloaded 2032 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 11:59 am
The GSE24558-GPL8736 File took multiple days to finish running and did not yield any files. Additionally, there were no visible error messages in the code.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:26 pm
Files for GSE13041-GPL570
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- GSE13041570zscore.txt
- (15.4 MiB) Downloaded 2113 times
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- GSE13041570dscrt.txt
- (3.72 MiB) Downloaded 2091 times
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- GSE13041570avg.txt
- (6.99 MiB) Downloaded 2059 times
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- GSE13041570aftexcel.txt
- (14.24 MiB) Downloaded 2082 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:33 pm
Files for GSE13041-GPL8300
- Attachments
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- GSE130418300zscore.txt
- (8.31 MiB) Downloaded 2020 times
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- GSE130418300dscrt.txt
- (1.98 MiB) Downloaded 2034 times
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- GSE130418300avg.txt
- (3.77 MiB) Downloaded 2003 times
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- GSE130418300aftexcel.txt
- (6.22 MiB) Downloaded 2044 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
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