Re: GEO Microarray Data Cleaning
Posted: Thu Apr 05, 2018 2:16 pmFiles for GSE63669
Files removed GPL cleaning ERROR
Files removed GPL cleaning ERROR
SMLG (Statistical Machine Learning Group) Discussion Forum
Changwon Yoo, S.M., Ph.D., PI
http://smlg.fiu.edu/phpbb/
GEO Microarray Data Cleaning
Page 2 of 6
Posted: Thu Apr 05, 2018 2:16 pmRe: GEO Microarray Data Cleaning
Posted: Mon Apr 09, 2018 5:13 pmFiles for GSE63669
Re: GEO Microarray Data Cleaning
Posted: Tue Apr 10, 2018 4:19 pmFiles for Super Series 62960
GSE62866
GSE62866
Re: GEO Microarray Data Cleaning
Posted: Tue Apr 10, 2018 4:41 pmFiles for Super Series 62960
GSE62870
GSE62870
Re: GEO Microarray Data Cleaning
Posted: Mon May 14, 2018 2:27 pmFiles for GSE81934
Updated Version of MicroArray Cleaning Code
Posted: Mon Jun 25, 2018 5:38 pmGood evening,
I have attached the most recent version of the cleaning code to this post.
Respectfully,
Efrain Gonzalez
I have attached the most recent version of the cleaning code to this post.
Respectfully,
Efrain Gonzalez
Re: GEO Microarray Data Cleaning
Posted: Tue Jun 26, 2018 1:09 pmFiles for GSE73038
Re: GEO Microarray Data Cleaning
Posted: Tue Jun 26, 2018 2:40 pmFiles for GSE6014
Re: GEO Microarray Data Cleaning
Posted: Tue Jun 26, 2018 2:43 pmFiles for GSE7696 series
GSE7696aftexcel.txt- (6.58 MiB) Downloaded 294 times
- GSE7696avg.txt
- (4.52 MiB) Downloaded 288 times
- GSE7696dscrt.txt
- (2.05 MiB) Downloaded 278 times
- GSE7696zscore.txt
- (8.98 MiB) Downloaded 242 times
Re: GEO Microarray Data Cleaning
Posted: Wed Jun 27, 2018 12:23 pmWhen processing GSE42670 (GPL4091), RStudio crashes with fatal error. This occurs during step 4 of error checking (between "##Is there a clean version of the GPL file available" and "##Changing the gene ID to gene name." ).