RNA-seq data from TCGA

GEO Brain Tumor Microarray and RNA-seq Data Cleaning

RNA-seq data from TCGA

Postby lauriyut » Tue Feb 27, 2018 12:45 am

To download data from TCGA specially microarray, first you have to go to the following website, http://www.cbioportal.org/data_sets.jsp. here you'll find each cancer type listed and what type of data is available for said cancer. I'm particularly interested in the Brain lower grade glioma which has 530 sample for RNA sequence data. Next to the name of each cancer is a download symbol. This downloads all the types of data available for that cancer type. Please find attach the RNA sequence data for Brain lower grade glioma.
Attachments
data_RNA_Seq_v2_mRNA_median_Zscores.txt
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lauriyut
 
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