GSE73199- GPL10123
After 10 hours of running the code, it arrived at an error. I've tried cleaning this file multiple times and all the other times, it didn't stop running, even if I left it to run overnight.
Below in the results the dscrt file is missing, but I assume it's because there is an error.
SMLG (Statistical Machine Learning Group) Discussion Forum
Changwon Yoo, S.M., Ph.D., PI
GEO Microarray Data Cleaning
Re: GEO Microarray Data Cleaning
by sbainazeersheikh » Tue Jul 17, 2018 12:01 pm
- Attachments
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GSE73199avg.txt- (1.47 MiB) Downloaded 2011 times
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- GSE73199zscore.txt
- (1.16 MiB) Downloaded 2077 times
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- GSE73199aftexcel.txt
- (48.26 MiB) Downloaded 2035 times
- sbainazeersheikh
- Posts: 7
- Joined: Sun Jun 24, 2018 5:27 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 3:50 pm
Files for GSE53228-GPL6480
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- GSE532286480zscore.txt
- (10.69 MiB) Downloaded 2074 times
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- GSE532286480dscrt.txt
- (2.67 MiB) Downloaded 2113 times
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- GSE532286480avg.txt
- (6.88 MiB) Downloaded 2093 times
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- GSE532286480aftexcel.txt
- (12.01 MiB) Downloaded 2061 times
Last edited by JoshK on Wed Jul 18, 2018 4:38 pm, edited 1 time in total.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 4:12 pm
Files for GSE49822
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- GSE49822zscore.txt
- (11.13 MiB) Downloaded 2089 times
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- GSE49822dscrt.txt
- (3.01 MiB) Downloaded 2108 times
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- GSE49822avg.txt
- (4.02 MiB) Downloaded 2113 times
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- GSE49822aftexcel.txt
- (8.42 MiB) Downloaded 2079 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 5:18 pm
Files for GSE42670-GPL6244
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- GSE426706244zscore.txt
- (24.21 MiB) Downloaded 2092 times
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- GSE426706244dscrt.txt
- (5.63 MiB) Downloaded 2092 times
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- GSE426706244avg.txt
- (12.07 MiB) Downloaded 2066 times
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- GSE426706244aftexcel.txt
- (20.96 MiB) Downloaded 2081 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:07 pm
Files for GSE36245
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- GSE36245zscore.txt
- (22.36 MiB) Downloaded 2100 times
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- GSE36245dscrt.txt
- (5.18 MiB) Downloaded 2153 times
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- GSE36245avg.txt
- (7.37 MiB) Downloaded 2142 times
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- GSE36245aftexcel.txt
- (16.04 MiB) Downloaded 2100 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:31 pm
Files for GSE32374
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- GSE32374zscore.txt
- (11.97 MiB) Downloaded 2091 times
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- GSE32374dscrt.txt
- (2.96 MiB) Downloaded 2098 times
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- GSE32374avg.txt
- (8.28 MiB) Downloaded 2143 times
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- GSE32374aftexcel.txt
- (16.12 MiB) Downloaded 2160 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 7:19 pm
Files for GSE25632
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- GSE256326884zscore.txt
- (14.45 MiB) Downloaded 2064 times
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- GSE256326884dscrt.txt
- (3.6 MiB) Downloaded 2089 times
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- GSE256326884avg.txt
- (7.88 MiB) Downloaded 2042 times
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- GSE256326884aftexcel.txt
- (13.09 MiB) Downloaded 2027 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 11:59 am
The GSE24558-GPL8736 File took multiple days to finish running and did not yield any files. Additionally, there were no visible error messages in the code.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:26 pm
Files for GSE13041-GPL570
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- GSE13041570zscore.txt
- (15.4 MiB) Downloaded 2110 times
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- GSE13041570dscrt.txt
- (3.72 MiB) Downloaded 2088 times
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- GSE13041570avg.txt
- (6.99 MiB) Downloaded 2055 times
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- GSE13041570aftexcel.txt
- (14.24 MiB) Downloaded 2077 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:33 pm
Files for GSE13041-GPL8300
- Attachments
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- GSE130418300zscore.txt
- (8.31 MiB) Downloaded 2016 times
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- GSE130418300dscrt.txt
- (1.98 MiB) Downloaded 2030 times
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- GSE130418300avg.txt
- (3.77 MiB) Downloaded 2000 times
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- GSE130418300aftexcel.txt
- (6.22 MiB) Downloaded 2042 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
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