GSE73199- GPL10123
After 10 hours of running the code, it arrived at an error. I've tried cleaning this file multiple times and all the other times, it didn't stop running, even if I left it to run overnight.
Below in the results the dscrt file is missing, but I assume it's because there is an error.
SMLG (Statistical Machine Learning Group) Discussion Forum
Changwon Yoo, S.M., Ph.D., PI
GEO Microarray Data Cleaning
Re: GEO Microarray Data Cleaning
by sbainazeersheikh » Tue Jul 17, 2018 12:01 pm
- Attachments
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GSE73199avg.txt- (1.47 MiB) Downloaded 595 times
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- GSE73199zscore.txt
- (1.16 MiB) Downloaded 587 times
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- GSE73199aftexcel.txt
- (48.26 MiB) Downloaded 602 times
- sbainazeersheikh
- Posts: 7
- Joined: Sun Jun 24, 2018 5:27 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 3:50 pm
Files for GSE53228-GPL6480
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- GSE532286480zscore.txt
- (10.69 MiB) Downloaded 595 times
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- GSE532286480dscrt.txt
- (2.67 MiB) Downloaded 606 times
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- GSE532286480avg.txt
- (6.88 MiB) Downloaded 593 times
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- GSE532286480aftexcel.txt
- (12.01 MiB) Downloaded 611 times
Last edited by JoshK on Wed Jul 18, 2018 4:38 pm, edited 1 time in total.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 4:12 pm
Files for GSE49822
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- GSE49822zscore.txt
- (11.13 MiB) Downloaded 610 times
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- GSE49822dscrt.txt
- (3.01 MiB) Downloaded 606 times
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- GSE49822avg.txt
- (4.02 MiB) Downloaded 587 times
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- GSE49822aftexcel.txt
- (8.42 MiB) Downloaded 594 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 5:18 pm
Files for GSE42670-GPL6244
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- GSE426706244zscore.txt
- (24.21 MiB) Downloaded 603 times
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- GSE426706244dscrt.txt
- (5.63 MiB) Downloaded 611 times
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- GSE426706244avg.txt
- (12.07 MiB) Downloaded 591 times
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- GSE426706244aftexcel.txt
- (20.96 MiB) Downloaded 603 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:07 pm
Files for GSE36245
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- GSE36245zscore.txt
- (22.36 MiB) Downloaded 599 times
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- GSE36245dscrt.txt
- (5.18 MiB) Downloaded 600 times
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- GSE36245avg.txt
- (7.37 MiB) Downloaded 611 times
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- GSE36245aftexcel.txt
- (16.04 MiB) Downloaded 606 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:31 pm
Files for GSE32374
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- GSE32374zscore.txt
- (11.97 MiB) Downloaded 605 times
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- GSE32374dscrt.txt
- (2.96 MiB) Downloaded 607 times
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- GSE32374avg.txt
- (8.28 MiB) Downloaded 601 times
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- GSE32374aftexcel.txt
- (16.12 MiB) Downloaded 607 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 7:19 pm
Files for GSE25632
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- GSE256326884zscore.txt
- (14.45 MiB) Downloaded 608 times
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- GSE256326884dscrt.txt
- (3.6 MiB) Downloaded 585 times
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- GSE256326884avg.txt
- (7.88 MiB) Downloaded 602 times
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- GSE256326884aftexcel.txt
- (13.09 MiB) Downloaded 578 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 11:59 am
The GSE24558-GPL8736 File took multiple days to finish running and did not yield any files. Additionally, there were no visible error messages in the code.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:26 pm
Files for GSE13041-GPL570
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- GSE13041570zscore.txt
- (15.4 MiB) Downloaded 588 times
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- GSE13041570dscrt.txt
- (3.72 MiB) Downloaded 583 times
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- GSE13041570avg.txt
- (6.99 MiB) Downloaded 597 times
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- GSE13041570aftexcel.txt
- (14.24 MiB) Downloaded 591 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:33 pm
Files for GSE13041-GPL8300
- Attachments
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- GSE130418300zscore.txt
- (8.31 MiB) Downloaded 494 times
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- GSE130418300dscrt.txt
- (1.98 MiB) Downloaded 518 times
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- GSE130418300avg.txt
- (3.77 MiB) Downloaded 511 times
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- GSE130418300aftexcel.txt
- (6.22 MiB) Downloaded 508 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
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