GSE73199- GPL10123
After 10 hours of running the code, it arrived at an error. I've tried cleaning this file multiple times and all the other times, it didn't stop running, even if I left it to run overnight.
Below in the results the dscrt file is missing, but I assume it's because there is an error.
SMLG (Statistical Machine Learning Group) Discussion Forum
Changwon Yoo, S.M., Ph.D., PI
GEO Microarray Data Cleaning
Re: GEO Microarray Data Cleaning
by sbainazeersheikh » Tue Jul 17, 2018 12:01 pm
- Attachments
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GSE73199avg.txt- (1.47 MiB) Downloaded 2092 times
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- GSE73199zscore.txt
- (1.16 MiB) Downloaded 2145 times
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- GSE73199aftexcel.txt
- (48.26 MiB) Downloaded 2115 times
- sbainazeersheikh
- Posts: 7
- Joined: Sun Jun 24, 2018 5:27 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 3:50 pm
Files for GSE53228-GPL6480
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- GSE532286480zscore.txt
- (10.69 MiB) Downloaded 2140 times
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- GSE532286480dscrt.txt
- (2.67 MiB) Downloaded 2193 times
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- GSE532286480avg.txt
- (6.88 MiB) Downloaded 2180 times
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- GSE532286480aftexcel.txt
- (12.01 MiB) Downloaded 2130 times
Last edited by JoshK on Wed Jul 18, 2018 4:38 pm, edited 1 time in total.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 4:12 pm
Files for GSE49822
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- GSE49822zscore.txt
- (11.13 MiB) Downloaded 2164 times
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- GSE49822dscrt.txt
- (3.01 MiB) Downloaded 2174 times
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- GSE49822avg.txt
- (4.02 MiB) Downloaded 2182 times
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- GSE49822aftexcel.txt
- (8.42 MiB) Downloaded 2167 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 5:18 pm
Files for GSE42670-GPL6244
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- GSE426706244zscore.txt
- (24.21 MiB) Downloaded 2163 times
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- GSE426706244dscrt.txt
- (5.63 MiB) Downloaded 2178 times
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- GSE426706244avg.txt
- (12.07 MiB) Downloaded 2148 times
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- GSE426706244aftexcel.txt
- (20.96 MiB) Downloaded 2156 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:07 pm
Files for GSE36245
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- GSE36245zscore.txt
- (22.36 MiB) Downloaded 2174 times
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- GSE36245dscrt.txt
- (5.18 MiB) Downloaded 2224 times
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- GSE36245avg.txt
- (7.37 MiB) Downloaded 2223 times
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- GSE36245aftexcel.txt
- (16.04 MiB) Downloaded 2175 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:31 pm
Files for GSE32374
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- GSE32374zscore.txt
- (11.97 MiB) Downloaded 2178 times
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- GSE32374dscrt.txt
- (2.96 MiB) Downloaded 2161 times
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- GSE32374avg.txt
- (8.28 MiB) Downloaded 2214 times
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- GSE32374aftexcel.txt
- (16.12 MiB) Downloaded 2224 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 7:19 pm
Files for GSE25632
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- GSE256326884zscore.txt
- (14.45 MiB) Downloaded 2136 times
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- GSE256326884dscrt.txt
- (3.6 MiB) Downloaded 2157 times
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- GSE256326884avg.txt
- (7.88 MiB) Downloaded 2115 times
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- GSE256326884aftexcel.txt
- (13.09 MiB) Downloaded 2106 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 11:59 am
The GSE24558-GPL8736 File took multiple days to finish running and did not yield any files. Additionally, there were no visible error messages in the code.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:26 pm
Files for GSE13041-GPL570
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- GSE13041570zscore.txt
- (15.4 MiB) Downloaded 2201 times
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- GSE13041570dscrt.txt
- (3.72 MiB) Downloaded 2160 times
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- GSE13041570avg.txt
- (6.99 MiB) Downloaded 2119 times
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- GSE13041570aftexcel.txt
- (14.24 MiB) Downloaded 2143 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:33 pm
Files for GSE13041-GPL8300
- Attachments
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- GSE130418300zscore.txt
- (8.31 MiB) Downloaded 2098 times
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- GSE130418300dscrt.txt
- (1.98 MiB) Downloaded 2091 times
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- GSE130418300avg.txt
- (3.77 MiB) Downloaded 2065 times
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- GSE130418300aftexcel.txt
- (6.22 MiB) Downloaded 2111 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
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