GSE73199- GPL10123
After 10 hours of running the code, it arrived at an error. I've tried cleaning this file multiple times and all the other times, it didn't stop running, even if I left it to run overnight.
Below in the results the dscrt file is missing, but I assume it's because there is an error.
SMLG (Statistical Machine Learning Group) Discussion Forum
Changwon Yoo, S.M., Ph.D., PI
GEO Microarray Data Cleaning
Re: GEO Microarray Data Cleaning
by sbainazeersheikh » Tue Jul 17, 2018 12:01 pm
- Attachments
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GSE73199avg.txt- (1.47 MiB) Downloaded 983 times
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- GSE73199zscore.txt
- (1.16 MiB) Downloaded 998 times
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- GSE73199aftexcel.txt
- (48.26 MiB) Downloaded 994 times
- sbainazeersheikh
- Posts: 7
- Joined: Sun Jun 24, 2018 5:27 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 3:50 pm
Files for GSE53228-GPL6480
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- GSE532286480zscore.txt
- (10.69 MiB) Downloaded 996 times
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- GSE532286480dscrt.txt
- (2.67 MiB) Downloaded 1014 times
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- GSE532286480avg.txt
- (6.88 MiB) Downloaded 1009 times
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- GSE532286480aftexcel.txt
- (12.01 MiB) Downloaded 1002 times
Last edited by JoshK on Wed Jul 18, 2018 4:38 pm, edited 1 time in total.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 4:12 pm
Files for GSE49822
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- GSE49822zscore.txt
- (11.13 MiB) Downloaded 1008 times
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- GSE49822dscrt.txt
- (3.01 MiB) Downloaded 1012 times
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- GSE49822avg.txt
- (4.02 MiB) Downloaded 994 times
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- GSE49822aftexcel.txt
- (8.42 MiB) Downloaded 1002 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 5:18 pm
Files for GSE42670-GPL6244
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- GSE426706244zscore.txt
- (24.21 MiB) Downloaded 1012 times
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- GSE426706244dscrt.txt
- (5.63 MiB) Downloaded 1015 times
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- GSE426706244avg.txt
- (12.07 MiB) Downloaded 990 times
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- GSE426706244aftexcel.txt
- (20.96 MiB) Downloaded 1017 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:07 pm
Files for GSE36245
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- GSE36245zscore.txt
- (22.36 MiB) Downloaded 1012 times
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- GSE36245dscrt.txt
- (5.18 MiB) Downloaded 989 times
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- GSE36245avg.txt
- (7.37 MiB) Downloaded 1017 times
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- GSE36245aftexcel.txt
- (16.04 MiB) Downloaded 997 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:31 pm
Files for GSE32374
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- GSE32374zscore.txt
- (11.97 MiB) Downloaded 1022 times
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- GSE32374dscrt.txt
- (2.96 MiB) Downloaded 1015 times
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- GSE32374avg.txt
- (8.28 MiB) Downloaded 1001 times
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- GSE32374aftexcel.txt
- (16.12 MiB) Downloaded 1012 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 7:19 pm
Files for GSE25632
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- GSE256326884zscore.txt
- (14.45 MiB) Downloaded 1014 times
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- GSE256326884dscrt.txt
- (3.6 MiB) Downloaded 1000 times
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- GSE256326884avg.txt
- (7.88 MiB) Downloaded 1003 times
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- GSE256326884aftexcel.txt
- (13.09 MiB) Downloaded 982 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 11:59 am
The GSE24558-GPL8736 File took multiple days to finish running and did not yield any files. Additionally, there were no visible error messages in the code.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:26 pm
Files for GSE13041-GPL570
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- GSE13041570zscore.txt
- (15.4 MiB) Downloaded 987 times
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- GSE13041570dscrt.txt
- (3.72 MiB) Downloaded 993 times
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- GSE13041570avg.txt
- (6.99 MiB) Downloaded 995 times
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- GSE13041570aftexcel.txt
- (14.24 MiB) Downloaded 992 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:33 pm
Files for GSE13041-GPL8300
- Attachments
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- GSE130418300zscore.txt
- (8.31 MiB) Downloaded 906 times
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- GSE130418300dscrt.txt
- (1.98 MiB) Downloaded 921 times
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- GSE130418300avg.txt
- (3.77 MiB) Downloaded 915 times
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- GSE130418300aftexcel.txt
- (6.22 MiB) Downloaded 931 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
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