GSE73199- GPL10123
After 10 hours of running the code, it arrived at an error. I've tried cleaning this file multiple times and all the other times, it didn't stop running, even if I left it to run overnight.
Below in the results the dscrt file is missing, but I assume it's because there is an error.
SMLG (Statistical Machine Learning Group) Discussion Forum
Changwon Yoo, S.M., Ph.D., PI
GEO Microarray Data Cleaning
Re: GEO Microarray Data Cleaning
by sbainazeersheikh » Tue Jul 17, 2018 12:01 pm
- Attachments
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GSE73199avg.txt- (1.47 MiB) Downloaded 971 times
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- GSE73199zscore.txt
- (1.16 MiB) Downloaded 981 times
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- GSE73199aftexcel.txt
- (48.26 MiB) Downloaded 973 times
- sbainazeersheikh
- Posts: 7
- Joined: Sun Jun 24, 2018 5:27 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 3:50 pm
Files for GSE53228-GPL6480
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- GSE532286480zscore.txt
- (10.69 MiB) Downloaded 979 times
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- GSE532286480dscrt.txt
- (2.67 MiB) Downloaded 1002 times
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- GSE532286480avg.txt
- (6.88 MiB) Downloaded 988 times
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- GSE532286480aftexcel.txt
- (12.01 MiB) Downloaded 991 times
Last edited by JoshK on Wed Jul 18, 2018 4:38 pm, edited 1 time in total.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 4:12 pm
Files for GSE49822
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- GSE49822zscore.txt
- (11.13 MiB) Downloaded 983 times
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- GSE49822dscrt.txt
- (3.01 MiB) Downloaded 994 times
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- GSE49822avg.txt
- (4.02 MiB) Downloaded 980 times
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- GSE49822aftexcel.txt
- (8.42 MiB) Downloaded 988 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 5:18 pm
Files for GSE42670-GPL6244
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- GSE426706244zscore.txt
- (24.21 MiB) Downloaded 993 times
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- GSE426706244dscrt.txt
- (5.63 MiB) Downloaded 999 times
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- GSE426706244avg.txt
- (12.07 MiB) Downloaded 967 times
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- GSE426706244aftexcel.txt
- (20.96 MiB) Downloaded 997 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:07 pm
Files for GSE36245
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- GSE36245zscore.txt
- (22.36 MiB) Downloaded 992 times
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- GSE36245dscrt.txt
- (5.18 MiB) Downloaded 976 times
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- GSE36245avg.txt
- (7.37 MiB) Downloaded 998 times
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- GSE36245aftexcel.txt
- (16.04 MiB) Downloaded 984 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:31 pm
Files for GSE32374
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- GSE32374zscore.txt
- (11.97 MiB) Downloaded 1002 times
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- GSE32374dscrt.txt
- (2.96 MiB) Downloaded 999 times
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- GSE32374avg.txt
- (8.28 MiB) Downloaded 982 times
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- GSE32374aftexcel.txt
- (16.12 MiB) Downloaded 995 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 7:19 pm
Files for GSE25632
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- GSE256326884zscore.txt
- (14.45 MiB) Downloaded 996 times
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- GSE256326884dscrt.txt
- (3.6 MiB) Downloaded 984 times
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- GSE256326884avg.txt
- (7.88 MiB) Downloaded 979 times
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- GSE256326884aftexcel.txt
- (13.09 MiB) Downloaded 962 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 11:59 am
The GSE24558-GPL8736 File took multiple days to finish running and did not yield any files. Additionally, there were no visible error messages in the code.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:26 pm
Files for GSE13041-GPL570
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- GSE13041570zscore.txt
- (15.4 MiB) Downloaded 975 times
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- GSE13041570dscrt.txt
- (3.72 MiB) Downloaded 969 times
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- GSE13041570avg.txt
- (6.99 MiB) Downloaded 973 times
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- GSE13041570aftexcel.txt
- (14.24 MiB) Downloaded 965 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:33 pm
Files for GSE13041-GPL8300
- Attachments
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- GSE130418300zscore.txt
- (8.31 MiB) Downloaded 894 times
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- GSE130418300dscrt.txt
- (1.98 MiB) Downloaded 905 times
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- GSE130418300avg.txt
- (3.77 MiB) Downloaded 895 times
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- GSE130418300aftexcel.txt
- (6.22 MiB) Downloaded 910 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
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