GSE73199- GPL10123
After 10 hours of running the code, it arrived at an error. I've tried cleaning this file multiple times and all the other times, it didn't stop running, even if I left it to run overnight.
Below in the results the dscrt file is missing, but I assume it's because there is an error.
SMLG (Statistical Machine Learning Group) Discussion Forum
Changwon Yoo, S.M., Ph.D., PI
GEO Microarray Data Cleaning
Re: GEO Microarray Data Cleaning
by sbainazeersheikh » Tue Jul 17, 2018 12:01 pm
- Attachments
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GSE73199avg.txt- (1.47 MiB) Downloaded 568 times
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- GSE73199zscore.txt
- (1.16 MiB) Downloaded 561 times
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- GSE73199aftexcel.txt
- (48.26 MiB) Downloaded 576 times
- sbainazeersheikh
- Posts: 7
- Joined: Sun Jun 24, 2018 5:27 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 3:50 pm
Files for GSE53228-GPL6480
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- GSE532286480zscore.txt
- (10.69 MiB) Downloaded 568 times
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- GSE532286480dscrt.txt
- (2.67 MiB) Downloaded 584 times
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- GSE532286480avg.txt
- (6.88 MiB) Downloaded 576 times
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- GSE532286480aftexcel.txt
- (12.01 MiB) Downloaded 586 times
Last edited by JoshK on Wed Jul 18, 2018 4:38 pm, edited 1 time in total.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 4:12 pm
Files for GSE49822
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- GSE49822zscore.txt
- (11.13 MiB) Downloaded 587 times
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- GSE49822dscrt.txt
- (3.01 MiB) Downloaded 587 times
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- GSE49822avg.txt
- (4.02 MiB) Downloaded 560 times
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- GSE49822aftexcel.txt
- (8.42 MiB) Downloaded 565 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 5:18 pm
Files for GSE42670-GPL6244
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- GSE426706244zscore.txt
- (24.21 MiB) Downloaded 582 times
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- GSE426706244dscrt.txt
- (5.63 MiB) Downloaded 592 times
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- GSE426706244avg.txt
- (12.07 MiB) Downloaded 571 times
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- GSE426706244aftexcel.txt
- (20.96 MiB) Downloaded 579 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:07 pm
Files for GSE36245
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- GSE36245zscore.txt
- (22.36 MiB) Downloaded 571 times
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- GSE36245dscrt.txt
- (5.18 MiB) Downloaded 568 times
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- GSE36245avg.txt
- (7.37 MiB) Downloaded 585 times
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- GSE36245aftexcel.txt
- (16.04 MiB) Downloaded 581 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:31 pm
Files for GSE32374
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- GSE32374zscore.txt
- (11.97 MiB) Downloaded 584 times
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- GSE32374dscrt.txt
- (2.96 MiB) Downloaded 588 times
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- GSE32374avg.txt
- (8.28 MiB) Downloaded 582 times
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- GSE32374aftexcel.txt
- (16.12 MiB) Downloaded 577 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 7:19 pm
Files for GSE25632
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- GSE256326884zscore.txt
- (14.45 MiB) Downloaded 587 times
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- GSE256326884dscrt.txt
- (3.6 MiB) Downloaded 567 times
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- GSE256326884avg.txt
- (7.88 MiB) Downloaded 580 times
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- GSE256326884aftexcel.txt
- (13.09 MiB) Downloaded 556 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 11:59 am
The GSE24558-GPL8736 File took multiple days to finish running and did not yield any files. Additionally, there were no visible error messages in the code.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:26 pm
Files for GSE13041-GPL570
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- GSE13041570zscore.txt
- (15.4 MiB) Downloaded 567 times
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- GSE13041570dscrt.txt
- (3.72 MiB) Downloaded 556 times
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- GSE13041570avg.txt
- (6.99 MiB) Downloaded 567 times
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- GSE13041570aftexcel.txt
- (14.24 MiB) Downloaded 568 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:33 pm
Files for GSE13041-GPL8300
- Attachments
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- GSE130418300zscore.txt
- (8.31 MiB) Downloaded 474 times
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- GSE130418300dscrt.txt
- (1.98 MiB) Downloaded 502 times
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- GSE130418300avg.txt
- (3.77 MiB) Downloaded 487 times
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- GSE130418300aftexcel.txt
- (6.22 MiB) Downloaded 481 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
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