by Olu1 » Thu Oct 03, 2019 2:24 pm
I try to make sense of the original glioblastoma data before merging by reviewing them in NCBI database, and i found out that some datasets grouped witth GRADE do not have any grade information. Also, some grouped with SURVIVAL do not have any survival info. Treatment group is okay.
The following were grouped as GRADE: GSE9885, GSE84010, GSE73038, GSE53228, GSE42670, GSE36426, GSE31545, GSE25632, GSE10878. But GSE9885, GSE73038 and GSE42670 do not have any grade info, even though the are tumor samples. Instead GSE9885 has survival info, although not extracted. It will be good to merged it with survival group instead.
The following also were grouped as SURVIVAL: GSE84010, GSE7696, GSE42670, GSE31545 but GSE42670 and GSE31545 do not have any survival info. I suggest the should be removed from the group.