Commit bb19c1c3639bfca2de290ce11096b8cad98d05eb
1 parent
b0ad80bb4c
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master
UPDATE!!!! Changed from i+1 < to i+1<=
by = "ID_REF" Will make a difference in any analysis that used this code
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RMatchGenes.R
| ... | ... | @@ -28,7 +28,7 @@ Check2Match <- function(){ | 
| 28 | 28 | eddnocd <- edd[-(1:numrows[2]),] | 
| 29 | 29 | |
| 30 | 30 | ##Fully matched both data sets | 
| 31 | - eddy <- inner_join(ednocd,eddnocd) | |
| 31 | + eddy <- inner_join(ednocd,eddnocd,by = "ID_REF") | |
| 32 | 32 | #Matches | 
| 33 | 33 | meds <- eddy[,1] | 
| 34 | 34 | |
| ... | ... | @@ -39,7 +39,7 @@ Check2Match <- function(){ | 
| 39 | 39 | read_delim(.,delim = "\t") | 
| 40 | 40 | eddnocd <- edd[-(1:numrows[i + 1]),] | 
| 41 | 41 | ##Fully matched both data sets | 
| 42 | - eddy <- inner_join(meds,eddnocd) | |
| 42 | + eddy <- inner_join(meds,eddnocd,by = "ID_REF") | |
| 43 | 43 | meds <- eddy[,1] | 
| 44 | 44 | |
| 45 | 45 | |
| ... | ... | @@ -52,7 +52,7 @@ Check2Match <- function(){ | 
| 52 | 52 | read_delim(.,delim = "\t") | 
| 53 | 53 | ednocd <- ed[-(1:numrows[j]),] | 
| 54 | 54 | #use meds to match | 
| 55 | - eddy <- inner_join(meds,ednocd) | |
| 55 | + eddy <- inner_join(meds,ednocd,by = "ID_REF") | |
| 56 | 56 | Finedm <- rbind(ed[1:numrows[j],],eddy) | 
| 57 | 57 | nam_fil_ed <- strsplit(edfile,"[\\|/]") %>% | 
| 58 | 58 | .[[1]] %>% |