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README.md
| 1 | 1. To execute the R code of CondIndependentTest.R, you need do some preparation. | 1 | 1. To execute the R code of CondIndependentTest.R, you need do some preparation. |
| 2 | a.) Install package "bnlearn" in R, (because I used "bnlearn" package in my code.): | 2 | a.) Install package "bnlearn" in R, (because I used "bnlearn" package in my code.): |
| 3 | install.packages("http://www.bnlearn.com/releases/bnlearn_latest.tar.gz") | 3 | install.packages("http://www.bnlearn.com/releases/bnlearn_latest.tar.gz") |
| 4 | b.) Download file CondIndependentTest.R and put it in a folder (For example, put it in folder "/home/zgong001/Documents/SprinklerDataset/CondIndependentTest.R"). | 4 | b.) Download file CondIndependentTest.R and put it in a folder (For example, put it in folder "/home/zgong001/Documents/SprinklerDataset/CondIndependentTest.R"). |
| 5 | 2. Execute the code. | 5 | 2. Execute the code. |
| 6 | a.)In Console of R, you type in: | 6 | a.)In Console of R, you type in: |
| 7 | source("/home/zgong001/Documents/SprinklerDataset/Rcode/CondIndependentTest.R") | 7 | source("/home/zgong001/Documents/SprinklerDataset/Rcode/CondIndependentTest.R") |
| 8 | The content in "" is the location where you put file CondIndependentTest.R. | 8 | The content in "" is the location where you put file CondIndependentTest.R. |
| 9 | If there are some errors, you should double check the path is correct. | 9 | If there are some errors, you should double check the path is correct. |
| 10 | b.)In Console of R, you type in something like the following: | 10 | b.)In Console of R, you type in something like the following: |
| 11 | CondIndTwoVar(filename = "/home/zgong001/Documents/SprinklerDataset/sprinkler1001.txt", methodu="x2", exfilename = "/home/zgong001/Documents/SprinklerDataset/pvalueSorted(sprinkler).xlsx") | 11 | CondIndTwoVar(filename = "/home/zgong001/Documents/SprinklerDataset/sprinkler1001.txt", methodu="x2", exfilename = "/home/zgong001/Documents/SprinklerDataset/pvalueSorted(sprinkler).xlsx") |
| 12 | filename: is the full path and file name of your data file. | 12 | filename: is the full path and file name of your data file. |
| 13 | methoudu: is the method you'll choose to do conditional independence test. You could choose "x2" or "mi". "x2" means Chi-Square Test of Independence and "mi" means mutual information test. | 13 | methoudu: is the method you'll choose to do conditional independence test. You could choose "x2" or "mi". "x2" means Chi-Square Test of Independence and "mi" means mutual information test. |
| 14 | exfilename: is the full path and excel file name which you want to output your test result. | ||
| 14 | exfilename: is the full path and excel file name which you want to output your test result. | ||
| 15 |