GEO datasets

Analyses related to genomic, proteomic, clinical and envirointal interactions in brain tumor

GEO datasets

Postby cwyoo » Wed Jan 20, 2016 8:44 pm

Please goto http://www.ncbi.nlm.nih.gov/geo/ and download gene expression data for Glioblastoma and Lower Grade Brain Cancer in human. Post the original data, discritized data, and analysis results of banjo and ARACNE.
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Re: GEO datasets

Postby stefmoore » Tue Jan 24, 2017 11:50 am

Attached is the original data for GSE37418.
Attachments
GSE37418.xlsx
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Re: GEO datasets

Postby cwyoo » Wed Jan 25, 2017 2:42 pm

stefmoore wrote:Attached is the original data for GSE37418.


Thanks, Stefanie and Katherine, please refer to http://smlg.fiu.edu/phpbb/viewtopic.php?f=10&t=99 and refer to two files attached by lsand039 on Tue Jul 26, 2016 9:53 am and on Wed Jul 27, 2016 11:12 am. Please combine those two files into one and check for any new datasets from GEO. Also check http://www.cbioportal.org/data_sets.jsp for 12 Central Nervous System/Brain tumor datasets and add if the datasets that are not in GEO.

Please specify subjects ethnicity and race information from the linked published papers. Please upload your progress here.
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Re: GEO datasets

Postby ktchi001 » Tue Apr 25, 2017 11:01 am

Composite file
Attachments
USA Brain Tumor .xlsx
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