GSE73199- GPL10123
After 10 hours of running the code, it arrived at an error. I've tried cleaning this file multiple times and all the other times, it didn't stop running, even if I left it to run overnight.
Below in the results the dscrt file is missing, but I assume it's because there is an error.
SMLG (Statistical Machine Learning Group) Discussion Forum
Changwon Yoo, S.M., Ph.D., PI
GEO Microarray Data Cleaning
Re: GEO Microarray Data Cleaning
by sbainazeersheikh » Tue Jul 17, 2018 12:01 pm
- Attachments
-
GSE73199avg.txt- (1.47 MiB) Downloaded 1984 times
-
- GSE73199zscore.txt
- (1.16 MiB) Downloaded 2052 times
-
- GSE73199aftexcel.txt
- (48.26 MiB) Downloaded 2010 times
- sbainazeersheikh
- Posts: 7
- Joined: Sun Jun 24, 2018 5:27 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 3:50 pm
Files for GSE53228-GPL6480
- Attachments
-
- GSE532286480zscore.txt
- (10.69 MiB) Downloaded 2045 times
-
- GSE532286480dscrt.txt
- (2.67 MiB) Downloaded 2090 times
-
- GSE532286480avg.txt
- (6.88 MiB) Downloaded 2066 times
-
- GSE532286480aftexcel.txt
- (12.01 MiB) Downloaded 2028 times
Last edited by JoshK on Wed Jul 18, 2018 4:38 pm, edited 1 time in total.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 4:12 pm
Files for GSE49822
- Attachments
-
- GSE49822zscore.txt
- (11.13 MiB) Downloaded 2058 times
-
- GSE49822dscrt.txt
- (3.01 MiB) Downloaded 2087 times
-
- GSE49822avg.txt
- (4.02 MiB) Downloaded 2087 times
-
- GSE49822aftexcel.txt
- (8.42 MiB) Downloaded 2048 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 5:18 pm
Files for GSE42670-GPL6244
- Attachments
-
- GSE426706244zscore.txt
- (24.21 MiB) Downloaded 2065 times
-
- GSE426706244dscrt.txt
- (5.63 MiB) Downloaded 2064 times
-
- GSE426706244avg.txt
- (12.07 MiB) Downloaded 2043 times
-
- GSE426706244aftexcel.txt
- (20.96 MiB) Downloaded 2055 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:07 pm
Files for GSE36245
- Attachments
-
- GSE36245zscore.txt
- (22.36 MiB) Downloaded 2072 times
-
- GSE36245dscrt.txt
- (5.18 MiB) Downloaded 2123 times
-
- GSE36245avg.txt
- (7.37 MiB) Downloaded 2112 times
-
- GSE36245aftexcel.txt
- (16.04 MiB) Downloaded 2073 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 6:31 pm
Files for GSE32374
- Attachments
-
- GSE32374zscore.txt
- (11.97 MiB) Downloaded 2067 times
-
- GSE32374dscrt.txt
- (2.96 MiB) Downloaded 2070 times
-
- GSE32374avg.txt
- (8.28 MiB) Downloaded 2113 times
-
- GSE32374aftexcel.txt
- (16.12 MiB) Downloaded 2135 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Wed Jul 18, 2018 7:19 pm
Files for GSE25632
- Attachments
-
- GSE256326884zscore.txt
- (14.45 MiB) Downloaded 2039 times
-
- GSE256326884dscrt.txt
- (3.6 MiB) Downloaded 2061 times
-
- GSE256326884avg.txt
- (7.88 MiB) Downloaded 2014 times
-
- GSE256326884aftexcel.txt
- (13.09 MiB) Downloaded 2003 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 11:59 am
The GSE24558-GPL8736 File took multiple days to finish running and did not yield any files. Additionally, there were no visible error messages in the code.
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:26 pm
Files for GSE13041-GPL570
- Attachments
-
- GSE13041570zscore.txt
- (15.4 MiB) Downloaded 2083 times
-
- GSE13041570dscrt.txt
- (3.72 MiB) Downloaded 2060 times
-
- GSE13041570avg.txt
- (6.99 MiB) Downloaded 2027 times
-
- GSE13041570aftexcel.txt
- (14.24 MiB) Downloaded 2052 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Re: GEO Microarray Data Cleaning
by JoshK » Tue Jul 31, 2018 12:33 pm
Files for GSE13041-GPL8300
- Attachments
-
- GSE130418300zscore.txt
- (8.31 MiB) Downloaded 1989 times
-
- GSE130418300dscrt.txt
- (1.98 MiB) Downloaded 2002 times
-
- GSE130418300avg.txt
- (3.77 MiB) Downloaded 1975 times
-
- GSE130418300aftexcel.txt
- (6.22 MiB) Downloaded 2013 times
- JoshK
- Posts: 14
- Joined: Thu May 10, 2018 5:22 pm
Who is online
Users browsing this forum: No registered users and 0 guests